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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs621666 chr3:59851124 A/G UBB chr17:16284112-16286059:+ 0.33 5.95 5.33E-9 Box Plot
THCA rs62240637 chr22:24054886 T/A IGLL3 chr22:25713888-25716191:+ -0.41 -7.74 5.89E-14 Box Plot
THCA rs62246379 chr3:47021837 G/A HAGH chr16:1845621-1877195:- 0.26 6.06 2.84E-9 Box Plot
THCA rs62275565 chr3:90351548 C/G STX19 chr3:93733213-93747454:- 0.46 6.64 8.34E-11 Box Plot
THCA rs62275605 chr3:90354891 C/T STX19 chr3:93733213-93747454:- 0.46 6.54 1.54E-10 Box Plot
THCA rs62275609 chr3:90356910 G/A STX19 chr3:93733213-93747454:- 0.5 6.94 1.29E-11 Box Plot
THCA rs62276239 chr3:90077991 C/T STX19 chr3:93733213-93747454:- 0.47 6.45 2.78E-10 Box Plot
THCA rs62276658 chr3:90403891 G/T STX19 chr3:93733213-93747454:- 0.46 6.7 5.84E-11 Box Plot
THCA rs62277685 chr3:90210049 T/A STX19 chr3:93733213-93747454:- 0.48 6.64 8.45E-11 Box Plot
THCA rs62277687 chr3:90216537 T/G STX19 chr3:93733213-93747454:- 0.51 6.94 1.27E-11 Box Plot
THCA rs62277724 chr3:90281205 G/A STX19 chr3:93733213-93747454:- 0.47 6.78 3.62E-11 Box Plot
THCA rs62277726 chr3:90281409 C/T STX19 chr3:93733213-93747454:- 0.51 6.95 1.2E-11 Box Plot
THCA rs62277730 chr3:90298313 G/A STX19 chr3:93733213-93747454:- 0.52 7.06 5.97E-12 Box Plot
THCA rs62277731 chr3:90301351 G/A STX19 chr3:93733213-93747454:- 0.53 7.16 2.97E-12 Box Plot
THCA rs623173 chr11:77529528 C/T INTS4L1 chr7:64601603-64694600:+ -0.63 -9.9 3.97E-21 Box Plot